Papers/Books

under construction

89 Publications

2017

Growing new generations of critical zone scientists. Wymore Adam S., Nicole R. West, Kate Maher, Pamela L. Sullivan, Adrian Harpold, Diana Karwan, Jill A. Marshall, Julia Perdrial, Daniella M. Rempe and Lin Ma (2017): Earth Surface Processes and Landforms 42 (14): 2498-2502 Cross-CZO National

2017

Variation in Biological Soil Crust Bacterial Abundance and Diversity as a Function of Climate in Cold Steppe Ecosystems in the Intermountain West, USA. Blay, E.S., Schwabedissen, S.G., Magnuson, T.S., Aho, K., Sheridan, P.P., and K.A. Lohse (2017): Microbial Ecology 74 (3): 691–700

2017 (In Press)

Designing a network of critical zone observatories to explore the living skin of the terrestrial Earth. Brantley, S.L., McDowell, W.H., Dietrich, W.E., White, T.S., Kumar, P., Anderson, S., Chorover, J., Lohse, K.A., Bales, R.C., Richter, D., Grant, G., and Gaillardet, J. (2017): Earth Surface Dynamics Cross-CZO National

2017

Reviews and syntheses: on the roles trees play in building and plumbing the critical zone. Brantley, Susan L., David M. Eissenstat, Jill A. Marshall, Sarah E. Godsey, Zsuzsanna Balogh-Brunstad, Diana L. Karwan, Shirley A. Papuga, Joshua Roering, Todd E. Dawson, Jaivime Evaristo, Oliver Chadwick, Jeffrey J. McDonnell, Kathleen C. Weathers (2017): Biogeosciences, 14, 5115-5142 Cross-CZO National

2017

Regional sensitivities of seasonal snowpack to elevation, aspect, and vegetation cover in western North America. Christopher J. Tennant, Adrian A. Harpold, Kathleen Ann Lohse, Sarah E. Godsey, Benjamin T. Crosby, Laurel G. Larsen, Paul D. Brooks, Robert W. Van Kirk, Nancy F. Glenn (2017): Water Resources Research 53 Cross-CZO National

2017 (In Review)

Rapid recovery of mesic mountain big sagebrush gross production and respiration following prescribed fire. Fellows, A., Flerchinger, G., Seyfried, M.S., and K.A. Lohse (2017): Ecosystems

2017 (In Review)

Water and Carbon Fluxes along a Climate Gradient in Sagebrush Ecosystems. Flerchinger, G.N., Fellows, A.W., Seyfried, M.S., Clark, P.E., Lohse, K.A. (2017): Agricultural and Forest Meteorology

2017 (In Review)

Distribution and accumulation of pyrogenic black carbon (PyC) following a low severity burn in northern New Mexico. Galanter, A., Cadol, D., and K.A. Lohse (2017): Earth Surface Processes and Landforms Cross-CZO National

2017 (In Review)

Hierarchy and Heterarchy: Defining system organizations to social-ecological research. Larson, D.M., Lybecker, D.I., Baxter, C.V., McBeth, M.K., and K.A. Lohse (2017): Bioscience

2017

Geochemical evolution of the Critical Zone across variable time scales informs concentration-discharge relationships: Jemez River Basin Critical Zone Observatory. McIntosh J.C., Schaumberg C., Perdrial J., Harpold A., Vázquez-Ortega A., Rasmussen C., Vinson D., Zapata-Rios X., Brooks P.D., Meixner T., Pelletier J., Derry L., Chorover J. (2017): Water Resources Research 53(5): 4169–4196 Cross-CZO National

2017 (In Review)

Predicting soil thickness on soil mantled hillslopes. Patton, N.P., Lohse, K.A., Seyfried, M., Crosby, B.T., and S.E. Godsey (2017): Science Advances

2017 (In Review)

Coarse Fraction Adjusted Bulk Density Estimates for Dryland Soils Derived from Felsic and Mafic Parent Materials. Patton, N.R., Lohse, K.A., Seyfried, M.S., Will, R., and S. Benner (2017): Geoderma

2017

Nitrogenase Activity by Biological Soil Crusts in Cold Sagebrush Steppe Ecosystems. Schwabedissen, S.G., Lohse, K.A., Reed, S.C., Aho, K.A., T.S. Magnuson (2017): Biogeochemistry 134 (1–2): 57–76

2017 (In Review)

Variation in carbon and water fluxes in sagebrush steppe communities along an elevation gradient spanning rain- to snow- dominated precipitation regimes . Sharma, H., K. Reinhardt, K. A. Lohse, K. Aho (2017): Agriculture and Forest Meteorology

2017 (In Press)

On the rocks: quantifying storage of inorganic soil carbon on gravels and determining pedon-scale variability. Stanbery, C.J., Pierce, J.L., Benner, S.G., and K. Lohse (2017): Catena 157: 436-442

2017 (In Review)

Regional sensitivities of seasonal snowpack to elevation, aspect, and vegetation cover in western North America. Tennant, C.J., Harpold, A.A., Lohse, K.A., Godsey, S.E., Crosby, B.T., Larsen, L.G., Brooks, P.D., R.W. Van Kirk, N. Glenn (2017): Water Resources Research 53: doi:10.1002/2016WR019374 Cross-CZO National

2017

Technical report: the design and evaluation of a basin-scale wireless sensor network for mountain hydrology. Zhang, Z., Glaser, S., Bales, R., Conklin, M., Rice, R., and D. Marks (2017): Water Resources Research, 53. 4487–4498.

2016

Controls on ecohydrologic properties in desert ecosystems: Differences in soil age and volcanic morphology. Beal, L., Huber, D., Godsey, S., Kobs-Nawotniak, S., and K. Lohse (2016): Geoderma

2016

Assessment of the timing of daily peak streamflow in a snow dominated watershed. Chen, X., Kumar, M., Wang, R., Winstral, A., and D. Marks (2016): Journal of Hydrometeorology

2016

Postfire grazing management effects on mesic sagebrush-steppe vegetation: spring grazing. Clark, P.E., Williams, C.J., Pierson, F.B., and S.P. Hardegree (2016): Journal of Arid Environments

2016 (In Press)

Mapping and understanding dry-season soil water drawdown by California montane vegetation. Fellows, A.W. and Goulden, M.L. (2016): Ecohydrology Cross-CZO

2016

Hydrologic response and recovery to prescribed fire and vegetation removal in a small rangeland catchment. Flerchinger, G.N., Seyfried, M.S., and S.P. Hardegree (2016): Ecohydrology

2016

Temporal Variability in Microclimatic Conditions for Grass Germination and Emergence in the Sagebrush Steppe. Hardegree, S.P., Sheley, R.L., Duke, S.E., James, J.J., Boehm, A.R., and G.N. Flerchinger (2016): Rangeland Ecology & Management

2016

Independent evaluation of the SNODAS snow depth product using regional-scale lidar-derived measurements. Hedrick, A., Marshall, H.P., Winstral, A., Elder, K., Yueh, S., and D. Cline (2016): The Cryosphere

2016

In vivo intestinal and placental transfer of carbamazepine at typical environmental concentrations from drinking water to the developing fetus brain. Kaushik, G., Huber, D.P., Cretekos, C., Bearden, S., Finney, B., and M.A. Thomas (2016): Biochemical and Biophysical Research Communications

2016

Saprolite genesis in complex terrain: hydrologic, lithologic, biologic, and microclimatic controls on aspect asymmetry within the critical zone. Klos, P.Z., Link, T., Seyfried, M., Patton, N., Lohse, K., Holbrook, W.S., Heinse, R., Durrett, W., E. Leonard (2016): Geomorphology

2016

Sensible Heat Balance Estimates of Transient Soil Ice Contents. Kojima, Y., Heitman, J.L., Flerchinger, G.N., Ren, T., and R. Horton (2016): Vadose Zone Journal

2016

Juniper encroachment impacts on catchment scale water availability in snow dominated sagebrush steppe systems. Kormos, P., Marks, D., Pierson, F., Williams, J., Flerchinger, G., Havens, S., Hendrick, A., Bates, J., Svejcar, A., and A. Winstral (2016): Rangeland Ecology & Management

2016

Trends and sensitivities of low streamflow extremes to discharge timing and magnitude in Pacific Northwest mountain streams. Kormos, P.R., Luce, C.H., Wenger, S.J., and W.R. Berghuijs (2016): Water Resources Research

2016

Ecosystem Water Availability in Juniper versus Sagebrush Snow-Dominated Rangelands. Kormos, P.R., Marks, D., Pierson, F.B., Williams, C.J., Hardegree, S.P., Havens, S., Hedrick, A., Bates, J., and T. Svejar (2016): Rangeland Ecology & Management

2016

Experimental Geomicrobiology: From Field to Laboratory. Magnuson, T.S., and R.N. Ledbetter (2016): Manual of Environmental Microbiology (4th Ed.). American Society for Microbiology Press.

2016

Spatiotemporal soil and saprolite moisture dynamics across a semi-arid woody plant gradient. Niemeyer, R.J., Heinse, R., Link, T.E., Seyfried, M.S., Klos, Z.P., Williams, C.J., and T. Nielson (2016): Journal of Hydrology

2016

Surface water input from snowmelt and rain throughfall in western juniper: potential impacts of climate change as shifts in semi-arid vegetation. Niemeyer, R.J., Link, T., Seyfried, M., and G. Flerchinger (2016): Hydrological Processes

2016

The Airborne Snow Observatory: fusion of scanning lidar, imaging spectrometer, and physically-based modeling for mapping snow water equivalent and snow albedo. Painter, T., Berisford, D., Boardman, J., Bormann, K., Deems, J., Gehrke, F., Hedrick, A., Joyce, M., Laidlaw, R., Marks, D., Mattmann, C., Mcgurk, B., Ramirez, P., Richardson, M., Skiles, S.M., Seidel, F., and A. Winstral (2016): Remote Sensing of Environment

2016

The cold rain-on-snow event of June 2013 in the Canadian Rockies -characteristics and diagnosis. Pomeroy, J., Fang, X., and D. Marks (2016): Hydrological Processes

2016

Simulating maize production, water and surface energy balance, and canopy temperature under full and deficit irrigation. Qi, Z., Ma, L., Bausch, W.C., Trout, T.J., Ahuja, L.R., Flerchinger, G.N., and Q.X. Fang (2016): Transactions of ASABE

2016

Simulation of long-term soil water dynamics at Reynolds Creek, Idaho: Implications for rangeland productivity. Seyfried, M., Finzel, J., Weltz, M., and K. Launchbaugh (2016): Ecohydrology

2016

Soil temperature variability in complex terrain measured using distributed fiber-optic temperature sensing. Seyfried, M., Link, T., and D. Marks (2016): Vadose Zone Journal

2016

Soil Temperature Variability in Complex Terrain MeasuredUsing Fiber-Optic Distributed Temperature Sensing. Seyfried, M., Link, T., Marks, D. and Murdock, M. (2016): Vadose Zone Journal

2016

Simulated water budget in a forested watershed within Priest River Experimental Forest, northern Idaho, USA. Wei, L., Link, T.E., Hudak, A.T., Marshall, J.D., Kavanagh, K.L., Abatzoglou, J.T., Zhou, H., Pangle, R.E., G.N. Flerchinger (2016): Hydrological Processes

2016

Ecohydrologic response and recovery of a semi-arid shrubland over a five year period following burning. Williams, C.J., Pierson, F.B., Kormos, P.R., Al-Hamdan, O.Z., Hardegree, S.P., and P.E. Clark (2016): Catena

2015

Soil Age and Geomorphology: Influence on Hydraulic Properties in Cold Desert Ecosystems. Beal, L., Huber, D., Godsey, S., Kobs-Nawotniak, S., and K. Lohse (2015): Geoderma

2015

Hydrological partitioning in the critical zone: Recent advances and opportunities for developing transferable understanding of water cycle dynamics. Brooks P.D., Chorover J., Fan Y., Godsey S.E., Maxwell R.M., McNamara J.P., and Tague C. (2015): Water Resources Research 51 (9): 6973-6987 Cross-CZO

2015

A unified approach to hydrologic modeling: Part 2 Comparison of alternative process representations. Clark, M., Nijssen, B., Lundquist, J., Kavetski, D., Rupp, D., Gutmann, E., Wood, A., Gochis, D., Rasmussen, R., Tarboton, D., Mahat, V., Flerchinger, G., and D. Marks (2015): Water Resources Research

2015

Simulation of long-term soil water dynamics at Reynolds Creek, Idaho: implications for rangeland productivity. Finzel, J.A., Seyfried, M.S., Weltz, M.A., and K. Launchbaugh (2015): Ecohydrology

2015

Modeling Temperature and Humidity Profiles withing Forest Canopies. Flerchinger, G., Reba, M., Link, T., and D. Marks (2015): Agricultural and Forest Meteorology

2015

A field comparison of multiple techniques to quantify groundwater–surface-water interactions. González-Pinzón, R., Ward, A., Hatch, C., Wlostowski, A., Singha, K., Gooseff, M., Haggerty, R., Harvey, J., Cirpka, O., and Brock, J. (2015): Freshwater Science, 34(1) Cross-CZO

2015

Laser vision: lidar as a transformative tool to advance critical zone science. Harpold, A. A., Marshall, J. A., Lyon, S. W., Barnhart, T. B., Fisher, B. A., Donovan, M., Brubaker, K. M., Crosby, C. J., Glenn, N. F., Glennie, C. L., Kirchner, P. B., Lam, N., Mankoff, K. D., McCreight, J. L., Molotch, N. P., Musselman, K. N., Pelletier, J., Russo, T., Sangireddy, H., Sjöberg, Y., Swetnam, T., and West, N. (2015): Hydrol. Earth Syst. Sci., 19, 2881-2897 Cross-CZO National

2015 (In Review)

Variable Groundwater Contributions Influence Nutrient Cycling in Montane Headwater Catchments. Harpold, A., Brooks, P., Perdrial, J., Lohse, K., McIntosh, J., Meixner, T., Zapata-Rios, X., Vazquez-Ortega, A., and J. Chorover (2015): Water Resources Research

2015

Bedrock infiltration estimates from a catchment in the mountain rain-snow transition zone. Kormos, P., McNamara, J., Seyfried, M., Marshall, H., Marks, D., and A. Flores (2015): Journal of Hydrology

2015

Aboveground Biomass Estimates of Sagebrush Using Terrestrial and Airborne LiDAR Data in a Dryland Ecosystem. Li, A., Glenn, N.F., Olsoy, P.J., Mitchell, J.J., and R. Shrestha (2015): Agricultural and Forest Meteorology

2015

Reynolds Creek Critical Zone Observatory Annual Report 2015. Lohse, K. (2015): Reynolds Creek CZO, University of Idaho

2015

Combining airborne LiDAR and hyperspectral data across local sites for upscaling shrubland structural information: lessons for HyspIRI . Mitchell, J., Spaete, L., Shrestha, R., and N. Glenn (2015): Remote Sensing of Environment

2015

Climate and landscape as drivers of carbon storage in forested headwater catchments: Insights from a complete C budget. Perdrial, J., Brooks, P., Swetnam, T., Lohse, K., Rasmussen, C., Litvak, M., Harpold, A., Zapata-Rios, X., Broxton, P., Mitra, B., Meixner, T., Condon, K., Huckle, D., Stielstra, C., Vazquez-Ortega, A., Lybrand, R., Holleran, M., Orem, C., Pelletier, J., and J. Chorover (2015): Global Change Biology

2015

Water resources: Research network to track alpine water. Pomeroy, J., Bernhardt, M., and D. Marks (2015): Nature Correspondence

2015

Snowpack sensitivity to perturbed climate changes in alpine catchments. Rasouli, K., Pomeroy, J., and D. Marks (2015): Hydrological Processes

2015

Climatic and landscape influences on soil moisture are primary determinants of soil carbon fluxes in seasonally snow-covered forest ecosystems. Stielstra C.M., Lohse K.A., Chorover J., McIntosh J.C., Barron-Gafford G.A., Perdrial J.N., Litvak M., Barnard H.R., Brooks P.D. (2015): Biogeochemistry 123(3): 447–465 Cross-CZO

2015

Climatic, Landscape, and Edaphic Controls on Soil Carbon Fluxes in Seasonally Snow Covered Forest Ecosystems. Stielstra, C., Lohse, K., Chorover, J., McIntosh, J., Barron-Gafford, G., Perdrial, J., Litvak, M., Barnard, H., and P. Brooks (2015): Biogeochemistry

2015

A simple framework for assessing the sensitivity of mountain watersheds to snowpack loss. Tennant, C.J., Crosby, B.T., Godsey, S.E., Van Kirk, R.W., and D.R. Derryberry (2015): Geophys. Res. Lett.

2015

Chapter 2 – The Role of Critical Zone Observatories in Critical Zone Science. White T., Brantley S., Banwart S., Chorover J., Dietrich W., Derry L., Lohse K., Anderson S., Aufdendkampe A., Bales R., Kumar P., Richter D., McDowell B. (2015): Developments in Earth Surface Processes 19: 15–78 Cross-CZO National

2014

Process-Based Modeling of Temperature and Water Profiles in the Seedling Recruitment Zone: Part 1 Model Validation. Bullied, W.H., Flerchinger, G.N., Bullock, P.R., and R.C. Van Acker (2014): Agricultural & Forest Meterology. 188:89–103

2014

Quantitative understating of daily streamflow peak timing and its seasonal variations in a snow dominated watershed. Chen, X., M. Kumar, R. Wang, A. Winstral and D. Marks (2014): Water Resources Research

2014

Modeling evapotranspiration and energy balance in a wheat-maize cropping system using the revised RZ-SHAW model. Fang, Q.X., Ma, L., Flerchinger, G.N., Qi, Z., Ahuja, L.R., Xing, H.T., Li, J., and Q. Yu (2014): Agricultural and Forest Meteorology. 194:218–229

2014

Comparison of methods for estimating evapotranspiration in a small rangeland catchment. Flerchinger, G.N., and M.S. Seyfried (2014): Vadose Zone Journal. 13:4

2014

Spatial patterns of vegetation, soils and microtopography from terrestrial laser scanning on two semi-arid hillslopes of contrasting lithology. Harman C.J., Lohse K.A., Troch P.A., Sivapalan M. (2014): Journal of Geophysical Research: Biogeosciences 119(2): 163-180 Cross-CZO

2014

Structure and processes controlling resource islands and microtopography on semi-arid hillslopes. Harman, C., Lohse, K.A., Troch, P., and M. Sivapalan (2014): Journal of Geophysical Research Biogeosciences Cross-CZO

2014

Response of three soil water sensors to variable solution electrical conductivity in different soils. Kargas, G., Kerkides, P., and M. Seyfried (2014): Vadose Zone Journal

2014

Evaluation of a two source snow-vegetation energy balance model for estimating surface energy fluxes in a rangeland ecosystem. Kongoli, C, W.P. Kustas, M.C., Anderson, J.M., Norman, J.G., Alfieri, G.N., Flerchinger and D. Marks (2014): Journal of Hydrometeorology, 15: 143-158

2014

Threshold Dynamics in Soil Carbon Storage for Bioenergy Crops. Koo, D.K., Quijano, J.C., Kumar, P., Chaoka, S., Bernacchi, C.J. (2014): Environmental Science & Technology

2014

Soil, snow, sub-surface storage data set from a mountain catchment in the rain–snow transition zone. Kormos, P., D. Marks, C. J. Williams, H. P. Marshall, P. Aishlin, D. G. Chandler and J. P. McNamara (2014): Earth Systems Science Data, 6: 165-173

2014

Analytical model for flow duration curves in seasonally dry climates. Müller, M.F., Dralle, D.N., and Thompson, S.E. (2014): Water Resources Research 50(7): 5510-5531. Cross-CZO

2014

The use of similarity concepts to represent sub-grid variability in hydrologic and land-surface models: Case study in a snowmelt dominated watershed. Newman, A., M. Clark, A. Winstral, D. Marks and M. Seyfried (2014): Journal of Hydrometeorology, early online release

2014

Aboveground total and green biomass of dryland shrub derived from terrestrial laser scanning. Olsoy, P.J., Glenn, N.F., Clark, P.E., Derryberry, D.R. (2014): ISPRS Journal of Photogrammetry and Remote Sensing 88: 166–173

2014

Sensitivity of model parameterizations for simulating latent heat flux over snow. Reba, M., D. Marks, T. Link, J. Pomeroy and A. Winstral (2014): Hydrological Processes, 28: 868-881

2014

Bacterial composition of soils in ponderosa pine and mixed conifer forests exposed to different wildfire burn severity. Weber C.F., Lockhart J.S., Charaska E., Aho K., Lohse K.A. (2014): Soil Biology and Biochemistry 69: 242-250 Cross-CZO

2014

Long-term snow distribution observations in a mountain catchment: assessing variability, self-similarity and the representativeness of an index site. Winstral, A., and D. Marks (2014): Water Resources Research, 50: 293–305

2014

Assessing the sensitivities of distributed snow models to forcing data resolution. Winstral, A., D. Marks and R. Gurney (2014): Journal of Hydrometeorology, 15(4): 1366-1383

2013

Freezing and Thawing Processes. Flerchinger, G.N., Lehrsch, G.A., and D.K. McCool (2013): Reference Module in Earth Systems and Environmental Sciences. Elsevier.

2013

Improved visibility calculations with tree trunk obstruction modeling from aerial LiDAR. Murgoitio, J, R Shrestha, N Glenn, and L Spaete (2013): International Journal of Geographical Information Science, 27 (10): 1865-1883

2013

Airborne LiDAR and terrestrial laser scanning derived vegetation obstruction factors for visibility models. Murgoitio, J, R Shrestha, N Glenn, and L Spaete (2013): Transactions in GIS

2013

Lidar-derived estimate and uncertainty of carbon sink in successional phases of woody encroachment. Sankey, T, R Shrestha, J Sankey, S Hardegree, and E Strand (2013): Journal of Geophysical Research: Biogeosciences, 118 (3): 1144-1155

2013

Anomalous trend in soil evaporation in semi-arid, snow-dominated watersheds. Wang, R., M. Kumar and D. Marks (2013): Advances in Water Resources, 57: 32-40

2013

Coupling of the simultaneous heat and water model with a distributed hydrological model and evaluation of the combined model in a cold region watershed. Zhang, Y., Cheng, G., Li, X., Han, X., Wang, L., Li, H., Chang, X., and G.N. Flerchinger (2013): Hydrological Processes. 27:3762-3776

2011

Errors in LiDAR-derived shrub height and crown area on sloped terrain. Glenn, N, L Spaete, T Sankey, D Derryberry, S Hardegree, and J Mitchell (2011): Journal of Arid Environments, 75 (4): 377-382

2011

Landsat-5 TM and LiDAR fusion for sub-pixel Juniper tree cover estimates in a western rangeland. Sankey, T and N Glenn (2011): Photogrammetric Engineering & Remote Sensing, 77 (12): 1241-1248

2011

LiDAR-Based Classification of Sagebrush Community Types. Sankey, T and P Bond (2011): Rangeland Ecology & Management, 64 (1): 92-98

2011

Vegetation and slope effects on accuracy of a LiDAR-derived DEM in the sagebrush steppe. Spaete, L, N Glenn, D Derryberry, T Sankey, J Mitchell, and S Hardegree (2011): Remote Sensing Letters, 2 (4): 317-326

2010

Characterizing western juniper expansion via a fusion of Landsat 5 Thematic Mapper and lidar data. Sankey, T, N Glenn, S Ehinger, A Boehm, and S Hardegree (2010): Rangeland Ecology & Management, 63 (5): 514-523

Papers and books that explicitly acknowledge a CZO grant are highlighted in PALE ORANGE.