Papers/Books

under construction

63 Publications

2020

Clades of huge phages from across Earth’s ecosystems. Al-Shayeb, B., R. Sachdeva, L.-X. Chen, F. Ward, P. Munk, A. Devoto, C. J. Castelle, M. R. Olm, K. Bouma-Gregson, Y. Amano, C. He, R. Meheust, B. Brooks, A. Thomas, A. Lavy, P. Matheus-Carnevali, C. Sun, D. S. A. Goltsman, M. A. Borton, A. Sharrar, A. L. Jaffe, T. C. Nelson, R. Kantor, R. Keren, K. R. Lane, I. F. Farag, S. Lei, K. Finstad, R. Amundson, K. Anantharaman, J. Zhou, A. J. Probst, M. E. Power, S. G. Tringe, W.-J. Li, K. Wrighton, S. Harrison, M. Morowitz, D. A. Relman, J. A. Doudna, A.-C. Lehours, L. Warren, J. H. D. Cate, J. M. Santini, and J. F. Banfield. (2020): Nature 578, 425–431

2020

Digging deeper: what the critical zone perspective adds to the study of plant ecophysiology. Dawson, T.E., Hahm, W.J., & Crutchfield-Peters, K. (2020): New Phytologist 226 (3): 666-671

2020 (In Press)

Combined use of radiocarbon and stable carbon isotopes for the source mixing model in a stream food web. Ishikawa, N.F., Finlay, J.C., Uno, H., Ogawa, N.O., Ohkouchi, N., Tayasu, T., Power, and Power, M.E. (2020): Limnology and Oceanography 1-14

2020

Partial migration alters population ecology and food chain length: evidence from a salmonid fish. Kelson, S. J., Power, M.E., Finlay, J.C., and S. M. Carlson (2020): Ecosphere 11 (2): e03044

2020

Temporal dynamics of migration‐linked genetic variation are driven by streamflows and riverscape permeability. Kelson, S.J., Miller, M.R., Thompson, T.Q., O'Rourke, S.M. & Carlson, S.M. (2020): Molecular Ecology 29 (5): 870-885

2020

Resolving Deep Critical Zone Architecture in Complex Volcanic Terrain. Moravec B.G., White A.M., Root R.A, Sanchez A., Olshansky Y., Paras B.K., Carr B., McIntosh J., Pelletier J.D., Rasmussen C., Holbrook W.S., Chorover J. (2020): Journal of Geophysical Research: Earth Surface 125(1): e2019JF005189 Cross-CZO

2020

Bacterial Secondary Metabolite Biosynthetic Potential in Soil Varies with Phylum, Depth, and Vegetation Type. Sharrar, A.M., Crits-Christoph, A., Méheust, R., Diamond, S., Starr, E.P., and Banfield, J.F. (2020): mBio 11 (3): e00416-20

2020 (In Press)

Tributary confluences are dynamic thermal refuges for a juvenile salmonid in a warming river network. Wang, T., Kelson, S.J., Greer, G., Thompson, S.E., and S.M. Carlson (2020): River Research and Applications

2019

Impacts of microbial assemblage and environmental conditions on the distribution of anatoxin-a producing cyanobacteria within a river network. Bouma-Gregson, K., Olm, M.R., Probst, A.J., Anantharaman, K., Power, M.E., & Banfield, J.F. (2019): The ISME Journal

2019

Ecological and genomic attributes of novel bacterial taxa that thrive in subsurface soil horizons. Brewer, Tess E., Emma L. Aronson, Keshav Arogyaswamy, Sharon A. Billings, Jon K. Botthoff, Ashley N. Campbell, Nicholas C. Dove, Dawson Fairbanks, Rachel E. Gallery, Stephen C. Hart, Jason Kaye, Gary King, Geoffrey Logan, Kathleen A. Lohse, Mia R. Maltz, Emilio Mayorga, Caitlin O’Neill, Sarah M. Owens, Aaron Packman, Jennifer Pett-Ridge, Alain F. Plante, Daniel D. Richter, Whendee L. Silver, Wendy H. Yang, Noah Fierer (2019): mBio Oct 2019, 10 (5) e01318-19 Cross-CZO National

2019

Arrested development: Erosional equilibrium in the southern Sierra Nevada, California, maintained by feedbacks between channel incision and hillslope sediment production. Callahan, R.P., Ferrier, K.L., Dixon, J., Dosseto, A., Hahm, W.J., Jessup, B.S., Miller, S.N., Hunsaker, C.T., Johnson, D.W., Sklar, L.S., Riebe, C.S. (2019): GSA Bulletin Cross-CZO

2019

Mediterranean grassland soil C–N compound turnover is dependent on rainfall and depth, and is mediated by genomically divergent microorganisms. Diamond, S., Andeer, P.F., Li, Z., Crits-Christoph, A., Burstein, D., Anantharaman, A., Lane, K.R., Thomas, B.C., Pan, C., Northen, T.R., and Banfield, J.F. (2019): Nature Microbiology 4: 1356–1367

2019

Hillslope hydrology in global change research and Earth system modeling. Fan, Y., Clark, M., Lawrence, D. M., Swenson, S., Band, L. E., Brantley, S. L., P. D. Brooks, W. E. Dietrich, A. Flores, G. Grant, J. W. Kirchner, D. S. Mackay, J. J. McDonnell, P. C. D. Milly, P. L. Sullivan, C. Tague, H. Ajami, N. Chaney, A. Hartmann, P. Hazenberg, J. McNamara, J. Pelletier, J. Perket, E. Rouholahnejad‐Freund, T. Wagener, X. Zeng, E. Beighley, J. Buzan, M. Huang, B. Livneh, B. P. Mohanty, B. Nijssen, M. Safeeq, C. Shen, W. van Verseveld, J. Volk, D. Yamazaki (2019): Water Resources Research, vol 55 Cross-CZO

2019 (In Review)

Chemical reactions, porosity, and microfracturing in shale during weathering: the effect of erosion rate . Gu, X., D.M. Rempe, W.E. Dietrich, A.J. West, T.-C. Lin, L. Jin, S.L. Brantley (2019): Geochimica Cosmochimica Acta (submitted) Cross-CZO

2019

Low Subsurface Water Storage Capacity Relative to Annual Rainfall Decouples Mediterranean Plant Productivity and Water Use From Rainfall Variability. Hahm, W.J., Dralle, D.N., Rempe, D.M., Bryk, A.B., Thompson, S.E., Dawson, T.E., and Dietrich, W.E. (2019): Geophysical Research Letters

2019

Lithologically Controlled Subsurface Critical Zone Thickness and Water Storage Capacity Determine Regional Plant Community Composition. Hahm, W.J., Rempe, D.M., Dralle, D.N., Dawson, T.E., Lovill, S.M., Bryk, A.B., Bish, D.L., Schieber, J. & Dietrich, W.E. (2019): Water Resources Research 55

2019

Do genomics and sex predict migration in a partially migratory salmonid fish, Oncorhynchus mykiss?. Kelson, S.J., Miller, M.R., Thompson, T.Q., O'Rourke, S.M., & Carlson S.M. (2019): Canadian Journal of Fisheries and Aquatic Sciences

2018

Widespread anatoxin-a detection in benthic cyanobacterial mats throughout a river network. Bouma-Gregson, K., Kudela, R.M., Power, M.E. (2018): PLoS One

2018

Novel soil bacteria possess diverse genes for secondary metabolite biosynthesis . Crits-Christoph, A., Diamond, S., Butterfield, C.N., Thomas, B.C., and J. F. Banfield (2018): Nature 558: 440–444

2018

Quantification of the seasonal hillslope water storage that does not drive streamflow. Dralle, D.N., Hahm, W.J., Rempe, D.M., Karst, N.J., Thompson, S.E., Dietrich, W.E. (2018): Hydrological Processes

2018

Beyond clay: towards an improved set of variables for predicting soil organic matter content. Rasmussen C., Heckman K., Wieder W.R., Keiluweit M., Lawrence C.R., Berhe A.A., Blankinship J.C., Crow S.E., Druhan J.L., Hicks Pries C.E., Marin-Spiotta E., Plante A.F., Schädel C., Schimel J.P., Sierra C.A., Thompson A., Wagai R. (2018): Biogeochemistry 137(3): 297–306 Cross-CZO

2018

Direct observations of rock moisture, a hidden component of the hydrologic cycle. Rempe, D. and Dietrich, W.E. (2018): Proceedings of the National Academy of Sciences

2018

In-situ nuclear magnetic resonance detection of fracture-held water in variably saturated bedrock. Rempe, D.M., Schmidt, L.M. & Hahm, W.J. (2018): SEG Technical Program Expanded Abstracts 2018

2018

Mercury sourcing and sequestration in weathering profiles at six Critical Zone Observatories. Richardson, Justin B., Arnulfo A. Aguirre, Heather L. Buss, A. Toby O'Geen, Xin Gu, Daniella M. Rempe, and Daniel deB. Richter (2018): Global Biogeochemical Cycles, 32(10):1542-1555 Cross-CZO National

2017

Growing new generations of critical zone scientists. Wymore, Adam S., Nicole R. West, Kate Maher, Pamela L. Sullivan, Adrian Harpold, Diana Karwan, Jill A. Marshall, Julia Perdrial, Daniella M. Rempe and Lin Ma (2017): Earth Surface Processes and Landforms 42 (14): 2498-2502 Cross-CZO National

2017

Rise and fall of toxic benthic freshwater cyanobacteria (Anabaena spp) in the Eel river: Buoyancy and dispersal. Bouma-Gregson, K., Power, M.E., and Bormans, M. (2017): Harmful Algae 66: 79-87

2017

Designing a network of critical zone observatories to explore the living skin of the terrestrial Earth. Brantley, S.L., McDowell, W.H., Dietrich, W.E., White, T.S., Kumar, P., Anderson, S., Chorover, J., Lohse, K.A., Bales, R.C., Richter, D., Grant, G., and Gaillardet, J. (2017): Earth Surface Dynamics, 5, 841–860 Cross-CZO National

2017

Reviews and syntheses: on the roles trees play in building and plumbing the critical zone. Brantley, Susan L., David M. Eissenstat, Jill A. Marshall, Sarah E. Godsey, Zsuzsanna Balogh-Brunstad, Diana L. Karwan, Shirley A. Papuga, Joshua Roering, Todd E. Dawson, Jaivime Evaristo, Oliver Chadwick, Jeffrey J. McDonnell, Kathleen C. Weathers (2017): Biogeosciences, 14, 5115-5142 Cross-CZO National

2017

Event-scale power law recession analysis: quantifying methodological uncertainty. Dralle, D. N., Karst, N. J., Charalampous, K., Veenstra, A., and Thompson, S. E. (2017): Hydrology and Earth System Sciences 21:65-81

2017

Stochastic modeling of interannual variation of hydrologic variables. Dralle, D.N., Karst, N., Muller, M., Vico, G., and Thompson, S.E. (2017): Geophysical Research Letters

2017

The influence of mixing on stable isotope ratios in porous media: A revised Rayleigh model. Druhan J.L, Maher K. (2017): Water Resources Research, 53, 1101–1124 Cross-CZO National

2017

The Frontier Beneath our Feet. Grant, G., and Dietrich, W.E. (2017): Water Resources Research 54 (4): 2605-2609 Cross-CZO National

2017

Controls on solute concentration-discharge relationships revealed by simultaneous hydrochemistry observations of hillslope runoff and stream flow: The importance of critical zone structure. Kim, Hyojin, William E. Dietrich, Benjamin M. Thurnhoffer, Jim K. B. Bishop, and Inez Y. Fung (2017): Water Resources Research, 53:1424-1443 Cross-CZO

2017

Expanding the role of reactive transport models in critical zone processes. Li Li, Kate Maher, Alexis Navarre-Sitchler, Jenny Druhan, Christof Meile, Corey Lawrence, Joel Moore, Julia Perdrial, Pamela Sullivan, Aaron Thompson, Lixin Jin, Edward W. Bolton, Susan L. Brantley, William E. Dietrich, K. Ulrich Mayer, Carl I. Steefel, Albert Valocchi, John Zachara, Benjamin Kocar, Jennifer Mcintosh, Benjamin M. Tutolo, Mukesh Kumar, Eric Sonnenthal, Chen Bao, Joe Beisman (2017): Earth-Science Reviews, 165:280-301 Cross-CZO

2017

Attached Algae: The Cryptic Base of Inverted Trophic Pyramids in Freshwaters. Vadeboncoeur, Y. and Power, M.E. (2017): Annual Review of Ecology, Evolution, and Systematics 48: 255-279

2016

California’s River Ecosystems. Power, M. E., Kupferberg, S.J., Cooper, S. D., and Deas, M.L. (2016): In H. Mooney & E. Zavaleta (Eds.), Ecosystems of California (p. 1008). University of California Press.

2015

An international initiative for science in the critical zone. Brantley, S. L., W. E. Dietrich, and S. Banwart (2015): EOS, 96, Published on 5 June 2015 Cross-CZO

2015

High Time for Conservation: Adding the Environment to the Debate on Marijuana Liberalization. Carah, J., Howard, J., Thompson, S.E., Short Gianotti, A.G., Bauer, S., Carlson, S.M., Dralle, D.N., Gabriel, M.W., Hulette, L., Johnson, B., Knight, C., Kupferberg, S., Martin, S., Naylor, R., Power, M.E. (2015): BioScience (Advance Access)

2015

The Landscape Evolution Observatory: A large-scale controllable infrastructure to study coupled Earth-surface processes. Pangle L.A., DeLong S.B., Abramson N., Adams J., Barron-Gafford G.A., Breshears D.D., Brooks P.D., Chorover J., Dietrich W.E., Dontsova K., Durcik M., Espeleta J., Ferre T.P.A., Ferriere R., Henderson W., Hunt E.A., Huxman T.E., Millar D., Murphy B., Niu G-Y., Pavao-Zuckerman M., Pelletier J.D., Rasmussen C., Ruiz J., Saleska S., Schaap M., Sibayan M., Troch P.A., Tuller M., van Haren J., Zeng X. (2015): Geomorphology 244: 190-203 Cross-CZO

2015

Climatic, ecophysiological, and phenological controls on plant ecohydrological strategies in seasonally dry ecosystems. Vico, Giulia Thompson, Sally E. Manzoni, Stefano Molini, Annalisa Albertson, John D. Almeida-Cortez, Jarcilene S. Fay, Philip A. Feng, Xue Guswa, Andrew J. Liu, Hu Wilson, Tiffany G. Porporato, Amilcare (2015): Ecohydrology 8(4): 660-681.

2015

Chapter 2 – The Role of Critical Zone Observatories in Critical Zone Science. White T., Brantley S., Banwart S., Chorover J., Dietrich W., Derry L., Lohse K., Anderson S., Aufdendkampe A., Bales R., Kumar P., Richter D., McDowell B. (2015): Developments in Earth Surface Processes 19: 15–78 Cross-CZO National

2014

Subcanopy solar radiation model: predicting solar radiation across a heavily vegetated landscape using LiDAR and GIS solar radiation models. Bode, C. A. Limm, M. P. Power, M. E. Finlay, J. C. (2014): Remote Sensing of Environment 154:387-397

2014

Spatially variable water table recharge and the hillslope hydrologic response: Analytical solutions to the linearized hillslope Boussinesq equation. Dralle, D.N. Boisramé, G., and Thompson, S. E. (2014): Water Resources Research 50:8515-8530.

2014

Species differences in the seasonality of evergreen tree transpiration in a Mediterranean climate: Analysis of multiyear, half-hourly sap flow observations. Link, P., K. Simonin, H. Maness, J. Oshun, T. Dawson, and I. Fung (2014): Water Resources Research

2014

Analytical model for flow duration curves in seasonally dry climates. Muller, M., D.N. Dralle and S.E.Thompson (2014): Water Resources Research 50 (7): 5510-5531

2014

A bottom-up control on fresh-bedrock topography under landscapes. Rempe, D.M., Dietrich, W.D. (2014): Proceedings of the National Academy of Sciences 111 (18): 6576-6581

2014

Vegetation induced changes in the stable isotope composition of near surface humidity . Simonin, K.A., Link, P., Rempe, D., Miller, S., Oshun, J., Bode, C., Dietrich, W.E., Fung, I. and Dawson T.E. (2014): EcoHydrology 7(3): 936-949.

2012

Anaerobic Oxidation of Methane in Tropical and Boreal Soils: Ecological Significance in Terrestrial Methane Cycling. Blazewicz, SJ, DG Petersen, MP Waldrop, MK Firestone (2012): Geophysical Research, Biogeosciences, V. 117: G02033

2012

Effect of rainfall-induced soil geochemistry dynamics on grassland soil microbial communities. Cruz-Martínez, K, A Rosling, Y Zhang, M Song, GL Andersen, JF Banfield (2012): Applied Environmental Microbiology, V.78 (21):7587

2012

Autonomous water sampling for long-term monitoring of trace metals in remote environments. Kim, H, JKB Bishop, TJ Wood, IY Fung (2012): Environmental Science & Technology, V.46 (20): 11220-11226

2012

Rain, rock moisture dynamics, and the rapid response of perched groundwater in weathered, fractured argillite underlying a steep hillslope. Salve, R, DM Rempe, WE Dietrich (2012): Water Resources Research 48 (11)

2009

Algal mats and insect emergence in rivers under Mediterranean climates: Towards photogrammetric surveillance. Power, ME, R Lowe, PC Furey, J Welter, M Limm, JC Finlay, C Bode, S Chang, M Goodrich, J Sculley (2009): Freshwater Biology, V.54, p.2101-2115

2008

Seasonal reassembly of a river food web: floods, droughts, and impacts of fish. Power, ME, MS Parker, WE Dietrich, (2008): Ecological Monographs, V.78, p.263-282

2005

Root functioning modifies seasonal climate. Lee, JE, RS Oliveira, TE Dawson, IY Fung (2005): Proceedings of the National Academy of Sciences of the United States of America, V.102 (49): 17576-17581

Papers and books that explicitly acknowledge a CZO grant are highlighted in PALE ORANGE.